PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00241.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 268aa    MW: 29112.2 Da    PI: 5.9095
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00241.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.1e-3073130359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ itY+ eHnh+
  Migut.M00241.1.p  73 DSWSWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLITYSCEHNHP 130
                       99************************998****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.6E-3163132IPR003657WRKY domain
SuperFamilySSF1182908.76E-2665132IPR003657WRKY domain
PROSITE profilePS5081131.66366132IPR003657WRKY domain
SMARTSM007749.8E-3571131IPR003657WRKY domain
PfamPF031064.6E-2573130IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MESRFDHVHE EESTTPPENT ADSPLSGDEP ADQETYAPLA KKSKRGAHKK VVTVPIGDAD  60
GFRSRGEVYP PPDSWSWRKY GQKPIKGSPY PRGYYRCSSS KGCPARKQVE RSRLDPTTLL  120
ITYSCEHNHP LPTTTKNHHH HHSLAAVAAA KSTSRSSSTT TTTTIDPPAN FPPEECAAFA  180
NQPDIEPADN GFVELAGEFG WLCDVGSTMM DGTTLVGPTW AHGDHAEVLM PIGEEDKVLF  240
GDLGDLPEYS VVFRRCRSET PCCGGTG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-1859132577Probable WRKY transcription factor 4
2ayd_A5e-18731321674WRKY transcription factor 1
2lex_A4e-1859132577Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837543.10.0PREDICTED: probable WRKY transcription factor 69
TrEMBLA0A022REM33e-96A0A022REM3_ERYGU; Uncharacterized protein (Fragment)
TrEMBLA0A068V5W41e-94A0A068V5W4_COFCA; Uncharacterized protein
STRINGPGSC0003DMT4000526373e-92(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74682232
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.12e-59WRKY DNA-binding protein 69